Saturday, July 21, 2007

Student Internship Programme - Cytology

Hey people, Desmond here. I've been attached to the cytology for 4 weeks now and have been doing non-gynaecological procedures for the first 3. In this posting, I will guide you through what is done from the time a urine specimen is recieved right until it is "reported" to the cytologist.

I will be posting pictures soon and feel free to ask any EASY questions =].

Subject title
Pathology (Cytology)

Aims
Cytology testing of Urine for malignancy

Introduction
The principle of cytology testing of urine is to differentiate the nucleus and cytoplasm of the cells to detect malignancy by comparing the Nucleus: Cytoplasm ratio (N:C ratio). The Papanicolaou staining method is used for this. It is a polychrome staining reaction (staining the cytoplasm of different cells different colours) designed to exhibit differences in cellular morphology, maturity and metabolic activity. Because intact cells in a cytological smear tend to overlap and some appear in 3D configurations, the greatest value of the Pap staining method are the resultant transparency of he cells and clear definition of nuclear detail.

Urine however has small number of cells; Cytocentrifugation is needed to pull the cells into a confined/defined region on the glass slide.

Materials
Glass slides
Depex
Xylene
Autostainer
Centrifuge
Cytocentrifuge
Cytocentrifuge funnel and clamp
10ml centrifuge tube
22mm by 22mm coverlips
Labels/Stickers
Shandon reagent
0.5% sodium hypochloride
Virkon solution

Methods
(a) Receiving Specimens (Urine)

1. Scan the time onto the patient’s form
2. Fill in the type of specimen and initials of the person receiving the specimen (e.g. DH)
3. Label the patient’s form with pre-made stickers which are chronologically numbered and bar-coded.
4. Assign a cytologist to the case and record details like case number and the cytologist assigned to the case.

(b) Processing specimen (urine)

1. Enter Biosafety Cabinet Level 2.
2. Remove the container with the patient’s urine from the biohazard bag
3. Compare IC numbers on patient form and the container
4. Label the container and a 10ml centrifuge tube with the pre-made stickers (e.g. NG1234/07)
5. Indicate on the patient’s form the following:
Volume of urine
Condition of urine (e.g. Colourless, bloody or yellowish)
Initials of the person processing the urine
Date
Number and type of stains required (in this case 2 Pap stains)
6. Gently mix the urine by overturning the container
7. Aliquot about 10ml of urine into the 10ml centrifuge tube
8. Centrifuge the urine for 10 minutes at 2000rpm.
9. Prepare 2 labelled glass slides for cytocentrifugation
10. Decant the supernatant into 0.5% Sodium Hypochloride
11. Add 6 drops of Shandon reagent to the cell pellet.
12. Mix by pipetting up and down
13. Add 3 drops of the mixture of cells and Shandon into the cytocentrifuge funnel.
14. Cytocentrifuge for 6 minutes at 800rpm
15. After cytocentrifugation, fix the glass slides in 95% alcohol.

(c) Staining

1. After fixation for 20 to 30 minutes, load the glass slides onto a staining rack.
2. Load the rack into the autostainer
3. Set the autostainer to the Papanicolaou staining programme.

(d) Mounting

1. After staining, mount the 2 glass slides.
2. Dip the glass slide into xylene
3. Add a drop of depex to the stained side of the glass slide
4. Place a coverlip on the Depex
5. Press out any air bubbles
6. Place the glass slides into an oven (45 degrees Celsius) to let the Depex solidfy (5 to 10 minutes)

(e) Microscopic observation and reporting

1. Observe under microscope to determine if there is an adequate number of cells or staining for the cytologist to detect any abnormalities/malignancy

2. Report the case including the patient’s form and glass slides to the cytologist to detect abnormalities (malignancy)

Results
(Reference)
Nuclei – Blue
Acidophillic cells – Red
Basophilic cells – Blue-green
Erythrocytes – Orange-red

(Urine tested)
Nucleus appears very large when compared to cytoplasm. There are multinucleated cells and the nuclei appear to be intensively stained blue-green.

Discussion

The patient’s Cells are malignant. There is nuclear enlargement without an increase in the overall size of the cell, giving a decreased cytoplasm to nuclear ratio. There is also hyperchromasia due to increased amounts of DNA. The nuclear outline appears irregular and there is a variation in size and shape. Moreover, nucleoli increase in size and number. Abnormal cell division results in multinucleation. Finally, there is uneven distribution and variation in size and chromatin particles.











Desmond Heng Chih Pheng


0503179D


TG02

13 comments:

J.A.M.M.Y.S said...

Hi Desmond,

You mentioned in the Materials section that there is this virkon solution. What is it and what is it for because it wasn't mentioned in the Methods.

Ming Boon
Tg01

VASTYJ said...

hi desmond,=)

what is Shandon reagent used for arhx ? thanks!

vaLerie XD

royal physicians said...

Hi desmond.

Wow! i didn't know u can can check for malignancy through the urine.

Anyway i'm just curious, what kind of malignancy are u looking at? izit specific to a particular organ? or just a preliminary test to detect malignant cells?

tanx

Nisha
TG02

first6weeks said...

Hello Valerie, Shandon reagent is actually a alcohol/CARBOWAX combination for direct specimen collection and fixation. It permits storage of specimens or unstained slides for weeks without adverse effects.

It is actually a colourless liquid dyed green so that the cytotech can determine if a samples recieved come in Shandon reagent. Specimens like CSFs sometimes come together with Shandon Reagent.

first6weeks said...

Hi Ming Boon, thanks for pointing that out, I forgot to mention what Virkon solution was used for. Virkon is a multi-purpose disinfectant that is used to disinfect the cytocentrifuge funnels after cytocentrifugation. The funnels are allowed to soak in the solution and the used liquid is disposed of at the end of the working day/shift.

Hi Nisha. A cytological analysis of urine is done to test for malignant cells from the bladder.

Likewise:

Pleural fluid - Lungs
Peritoneal - Stomach
Breast FNAc - Breast

first6weeks said...

I would also like to clarify that the cytology lab also screens for disease states or micro-organic infections like bacteria infection in the urinary tract or fungal infection found in Pap smears.

royal physicians said...

hi Desmond!

I have the same question as Nisha actually..When u see enlarged nucleus in the cells found in the urine, may i know like which part of the organ is suffering from the malignancy? Thanks!

Kangting
0503331A
TG02

DeZmOnD said...

Hello Kangting.

The malignant cells found in the urine could be from the bladder or from the urinary tract. These cells are usually squamous cells.

VASTYJ said...

Hey desmond,

You get to use an autostainer, not fair. We do our gram stains manually, sad.
Anyway, i wanted to ask, all u just do is place the glass slide in the machine and set the appropriate programme? What actually happens inside? How do u maintain the machine with the usage of these stains?

Andre, TG01

first6weeks said...

Hello Andre,

Thank you for you question.


Firstly I would like to clarify that there are a few types of staining methods in the Cytology Laboratory. Three of these staining methods are the Papanicolaou method, the Ziehl-Nelson method and the Diff-Quik method. Excluding the Papanicolaou method, the other staining methods are done manually.

As for the first part of your question, it is true that the cytotech only has to load the glass slides (in a staining rack) into the autostainer and set the programme. Later, he or she would only have to manually mount the glass slides with Depex and appropriately sized coverslips.

The autostainer contains the dyes required for the Papanicolaou staining method such as:

1. Haematoxylin - Stains nuclei
2. Orange G - Stains Keratin
3. Eosin Y - Stains superficial cells (e.g. squamous cells)
4. Second EA (Eosin Azure) counterstain

Besides the dyes, the autostainer also contains xylene and various grades of alcohol for the hydration
and fixation steps.


As for maintenance, the cytotech has to use a hard piece of tissue paper to remove the thicker, partly hardened upper layer of the dyes every morning. He or she also has to ensure that the levels of all dyes/liquids are adequate, most of these dyes are mixed manually; the alchols have to be diluted to their various grades as well.

ALsubs said...

hey desmond...

you mentioned that you need to add 6 drops of Shandon reagent to the cell pellet.what does the shandon reagent do??

Vinodhini
TGO2

first6weeks said...

hihi,

in the materials list, u mention about the virkon solution. may i know what is virkon solution and the purpose of it?

Thank

Juexiu
TG02

first6weeks said...

I have already answered those 2 questions about Shandon reagent and Virkon solution.