Saturday, July 28, 2007

SIP- Histopathology

Hey everyone! I'm attached to Histopathology for the whole of 20 weeks. This week, i'm scheduled to do special staining for one month. Most specimens will undergo routine H&E (Haematoxylin & Eosin) stanining while some will need special stains for diagnosis.

After fishing of specimens onto slides, excess water must be drained out before placing on the hotplate for 3 minutes to melt off the wax. Then, it can be loaded into a rack for staining.

H&E staining
Principle: The purpose is to demonstrate the tissue constituents in contrasting colours. Hamatoxylin gis oxidised to haematein in the presence of an oxidising agent. Haematein is taken up by nucleic acids present in the nuclues in the presence of a mordant which are usually metallic salts that is able to chelate the haematein dye to the tissue component. Eosin stains the cytoplasm and connective tissue pink.
For routine H&E staining, the process is fully automated with the help of this machine (Leica Autostainer XL):



Extracted from:http://www.spencerscicorp.com/html/slidestain.html

This is how it works: After loading the rack into the machine, press LOAD and check that the machine is programmed to routine H&E staining. After that, the whole staining process will be carry out by the machine in this format:

1) Xylene--> 2 minutes

2) Xylene--> 2 minutes

* Steps 1 & 2- remove wax that has not melt off as wax are not water soluble.

3) Abs alcohol--> 1 minute

4) 95% alcohol--> 1 minute

5) 70% alcohol--> 1 minute

*Steps 3-5- remove xylene and rehydrate the specimens

6) Water--> 1 minute

*As haematoxylin (Hx) is aqueous based, must wash with water first

7) Hx--> 4 minutes

8) Hx--> 3 minutes

* Steps 7 & 8- stain the whole specimen 9)

9) Water--> 1/2 minute

10) 0.5% acid alcohol--> 2 dips

* Differentiation- remove excess Hx
11) Water--> 1 minute

12) Lithium carbonate--> 2 minutes

* An alkali which blue the specimen when place in water

13) Water--> 2 miuntes

* Blue in water

14) Water--> 3 minutes

15) Eosin--> 1/2 minutes

* Stains cytoplasm

16) 70% alcohol--> 1 minute

17) 95% alcohol--> 1 minute

18) 4 rounds of abs alcohol--> each for 1 minute

* Steps 16-18- dehydration as water cannot mix with xylene)

19) 3 rounds of xylene--> each for 1 minute

* Remove alcohol as depex used for mounting is xylene-based and also to raise refractive index of tissue

Results:

  • Nucleur component- blue
  • Cytoplasmic component- red

After the above process, the specimens will be send for mounting which is also automated.

Special staining

Principle: Some cases need special stains for diagnosis. H&E is not able to demonstrate the desired components.

Types of special stains:

  • Periodic Acid Schiff

  • GMS Fungus

  • Reticullum ll

  • Alcian Blue

  • Iron

  • Giemsa

  • Congo Red

  • Gram
Procedures:
1) Print barcode label(s) (according to biopsy number assgined to the specimen)
2) Paste lable(s) on the frosted end of the slide
3) Dewax and hydrate slide
4) Load the slide covered with special wash solution to prevent the specimen from drying up into the instument
5) Load appropriate stain kit into the reagent carousel (depending on the type of stains)
6) Select Run
* Pre-checklist will appear. Ensure all slides and reagent kit are in place. Cap of reagent kit must be open.
7) Enter number of slides and hit the Run button
The machine will now initiate the staining by reading the slide and reagent barcode labels. After the barcodes are read, information for the staining will be 'downloaded' from the NexES computer to the staining module and the run will resume. When the run has completed, click 'SIGN OFF' and remove the slides from the instument. Drain slides then load into rack and place in 95% alcohol to remove residual liquid before dehydration, clearing and mounting.

Manual Staining
Principle: The Ventana NexES machine are not able to carry out some special stains. An example is the Ziehl Neelsen staining. (I only perform this manual staining so far)

Tuberculosis Test/ Ziehl Neelsen:
Principle:To demomonstrate acid fast bacteria belonging to the genus mycobacterium responsible for causing tuberculosis. (diagnosis test for tuberculosis)

Control: Any tissue containing acid fast organism.

Reagents required:
  • Commercial TB colour carbo reagent--> stains tubercle bacilli red
  • Loeffler's Methylene Blue--> background staining
  • 1% potassium hydroxide
  • 1% acid alcohol

    Procedures:
    1) Dewax and bring sections to water
    2) Stain with commercial TB colour carbo reagent for 5 minutes
    3) Wash in running water
    4) Differentiate with 2 rounds of 1% acid alcohol until colourless (patient is negative), light pink (patient is positive)
    5) Wash in water
    6) Counterstain with 1% Loeffler's methylene blue for 10-15 seconds
    7) Wash in water and go to 95% alcohol to control intensity of the blue colour
    *if very blue, go to 70% alcohol (the more diluted the alcohol, the greater the differentiation)
    8) Check under microscope, if too much blue has gone off due to differentiation, repeat steps 6&7
    9) Dehydrate in absolute alcohol, clear in 3 rounds of xylene and mount

    Results:
  • Positve- red tubercle bacilli on blue background
  • Negative- sky blue

Finally, its the end of my long posting. LOL. Feel free to ask me any easy questions. Hope you guys continue to learn more from SIP! Take care.=)

June Tham
TG02
0505073G










17 comments:

first6weeks said...

hey june!

what are some of the cases that need special stain for diagnosis? can you further elaborate on some examples? thanks:)

kai lin :)

royal physicians said...

Hello!

oh, i m also doing H&E over at my lab =) But i am using ammonium hydroxide for my "blueing" instead of luthium carbonate. Do u think it will make a difference in using these 2 reagents?

Chen Kangting
0503331A
TG02

BloodBank.MedMic.Haematology said...
This comment has been removed by the author.
BloodBank.MedMic.Haematology said...

heyheys JUNEE!

1) is Ziehl Neelsen be used for the diagnosis of Tuberculosis only? can it be tested for other diseases as well?

2) what's the 1% potassium hydroxide for in the test?

thanks!(:

dorothy
tg01

VASTYJ said...

hey junnie ~!!

u mentioned about the special stain and H&E stain, so what is the difference arhx ?

vaLerie XD

The Lab Freaks said...

hi June

what are the other kinds of manual staining?

Xuefang
0503328G
tg01

Star team said...

hey,

Im interested to know what Giemsa stain is used for can you elaborate on that point? Thanks.


Randall
TG02
0503272G

The Lab Freaks said...

hey june!

erm does your lab do other type of testing for TB?
cause mine do; they did the fast acid test, which gota use a different kinda microscope to view it in a dark room.

Natalie
TG01

VASTYJ said...

hi june!

"18) 4 rounds of abs alcohol--> each for 1 minute"

what is abs alcohol?
oh yes, all stains are automated? are there any manual things that you do?

Ying Ying
TG01

first6weeks said...

To Kailin: It depends actually. The doctors will look at the physical symptoms and clinical history of the patient and then perform a H&E staining which is usually enough to confirm their doubts. But special stains will be requested to further confirm their initial diagnosis. The most common example that i can think of is renal cases.

To Kangting: There is no difference between the 2 reagents. They serve the same function. Our lab uses lithium carbonate as ammonium hydroxide is quite smelly. (according to my colleage)

To Dorothy: Ziehl Neelsen can only be use to diagnose TB as its specific to acid fast bacteria.
1% potassium hydroxide is one of the ingredients for the working solution to be use in TB test. It activates (ripens)Loeffler's methylene blue (for backgground staining) so that the dye can penetrate the tissue and stain it.

To Valerie: The difference is that H&E staining is a routine procedure. All specimens must undergo H&E while we only perform special staining upon doctor's request.

To xuefang: There are many types of manual staining. According to my colleage, all stains are to be perfrom manually. But, if its in high demand and if the steps are easy to perform, we will leave it to the machine (Ventana NexES). Some examples of the manual stains are (what i have seen so far): Congo Red (stains amyloid), Masson Trichrome (stains muscle), Gram stain (stains positive and negative bacteria), Luxol Fast Blue (stains myelin), Perl's reaction (demonstrates iron and hemosiderin), Giemsa (stains helicobacter, mucincarmine (stains mucin, Periodic Acid Schiff (stains carbohydrate, Liver Orcein (stains elastic tissues.

To Randall: Giemsa stain is use to demonstrate H. pyloric (helicobacter). There are 2 types of Giemsa stain. One is call the Jenner's method while the other is call the Lennert method. Jenner's--> stain bone marrow and gastric biopsies to demonstrate helicobacter (differentiate cells present in hemopoietic tissues).Lennert--> stain bone marrow and lymph node (differentiate cells present in haemopoietic tissues).

To Natalie:Nope, my lab only use the TB test to diagnose for TB.

To Yingying: abs alcohol means absolute alcohol (100%). The sentence means go through 4 changes of absolute alcohol. There are many types of special stains that cant be done by the machine. Normally, we use the machine for GMS-F (stains fungus), PAS (stains carbohydrate), FE (demonstrate iron), RET (srains reticullin fibers)and Giemsa (stains helicobacter). If there are a lot of slides that request for the above stains, we will use the machine to perform the staining. If not, they can actually be done maually.

Hope i answer all your questions!=)

royal physicians said...

hey June,

Sometimes i wonder what happens if all this automated machines fail to operate..hehe..oFF day i guess..lol

Aniway, it would be great if u can tell me what kind of patient samples(what type of tissue) are taken for tuberculosis test?

Nisha
TG02

we are the XiaoBianTai-7! said...

Hey June,
What do you mean by colourless means negative and light pink meaning positive?
Thanks yo! =D

Charmaine Tan
TG01

first6weeks said...

To Nisha: According to my colleague, intestinal tissue will be taken for TB testing. Usually, we will run a control before staining patient's samples. The control can be any tissue contianing acid fast bacteria (eg: liver, cardiac muscle, zena reticular on the normal adrenal cortex, interstitial cells of testis, cytoplasm of neurones in brain, spinal cord and ganglia.

To charmaine: What i meant was after differentiation using 1% acid alcohol, the tissue will either appear colourless or ligh pink. If it is colourless, the patient negative for TB, but if it appear light pink, means the patient is TB positive.

ALsubs said...

hi junE

whats does the Counterstain with 1% Loeffler's methylene blue do??

Vinodhini
TGO2

first6weeks said...

To Vino: It serve as background staining so that the TB bacilli can be seen clearly. But, it must not be too dark. The ideal colour would be sky blue.

VASTYJ said...
This comment has been removed by the author.
VASTYJ said...

hi.. juz wondering for other stains.. do ur lab do it manually or also automated as H&E.. and can u elaborate on GMS Fungus that u mentioned in ur lab. And one last qn.. do u experienced like tissues being washed off like wad we experienced during our lab sessions for histotech too?

Jia Hao